http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&feed=atom&action=history
Statistics iRefIndex 9.0 - Revision history
2024-03-29T12:06:15Z
Revision history for this page on the wiki
MediaWiki 1.33.0
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=4079&oldid=prev
PaulBoddie: Used proper links.
2012-02-16T13:45:16Z
<p>Used proper links.</p>
<table class="diff diff-contentalign-left" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 13:45, 16 February 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l38" >Line 38:</td>
<td colspan="2" class="diff-lineno">Line 38:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">* </del>Full list [[<del class="diffchange diffchange-inline">http</del>:<del class="diffchange diffchange-inline">//irefindex.uio.no/wikifiles//images/f/fa/</del>iRefIndex9_taxonomy_summary.txt]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Full list<ins class="diffchange diffchange-inline">: </ins>[[<ins class="diffchange diffchange-inline">File</ins>:iRefIndex9_taxonomy_summary.txt]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>===Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)=== </div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>===Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)=== </div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l76" >Line 76:</td>
<td colspan="2" class="diff-lineno">Line 76:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>| 1392 || Bacillus anthracis || 3090</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>| 1392 || Bacillus anthracis || 3090</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">* </del>Full list [[<del class="diffchange diffchange-inline">http</del>:<del class="diffchange diffchange-inline">//irefindex.uio.no/wikifiles//images/f/fa/</del>iRefIndex9_taxonomy_summary_corrected.txt]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> </div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Full list<ins class="diffchange diffchange-inline">: </ins>[[<ins class="diffchange diffchange-inline">File</ins>:iRefIndex9_taxonomy_summary_corrected.txt]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td></tr>
</table>
PaulBoddie
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=4078&oldid=prev
PaulBoddie: Added complete file links.
2012-02-16T13:43:19Z
<p>Added complete file links.</p>
<table class="diff diff-contentalign-left" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 13:43, 16 February 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l38" >Line 38:</td>
<td colspan="2" class="diff-lineno">Line 38:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Full list [[http://irefindex.uio.no/wikifiles//images/<del class="diffchange diffchange-inline">1</del>/<del class="diffchange diffchange-inline">15</del>/<del class="diffchange diffchange-inline">Interactions_by_taxonomy_beta8_original</del>.<del class="diffchange diffchange-inline">pdf</del>]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Full list [[http://irefindex.uio.no/wikifiles//images/<ins class="diffchange diffchange-inline">f</ins>/<ins class="diffchange diffchange-inline">fa</ins>/<ins class="diffchange diffchange-inline">iRefIndex9_taxonomy_summary</ins>.<ins class="diffchange diffchange-inline">txt</ins>]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>===Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)=== </div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>===Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)=== </div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l76" >Line 76:</td>
<td colspan="2" class="diff-lineno">Line 76:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>| 1392 || Bacillus anthracis || 3090</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>| 1392 || Bacillus anthracis || 3090</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|}</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Full list [[http://irefindex.uio.no/wikifiles//images/<del class="diffchange diffchange-inline">c</del>/<del class="diffchange diffchange-inline">c3</del>/<del class="diffchange diffchange-inline">Interactions_by_taxonomy_beta8_corected</del>.<del class="diffchange diffchange-inline">pdf</del>]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Full list [[http://irefindex.uio.no/wikifiles//images/<ins class="diffchange diffchange-inline">f</ins>/<ins class="diffchange diffchange-inline">fa</ins>/<ins class="diffchange diffchange-inline">iRefIndex9_taxonomy_summary_corrected</ins>.<ins class="diffchange diffchange-inline">txt</ins>]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td></tr>
</table>
PaulBoddie
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=4075&oldid=prev
PaulBoddie: Added taxonomy tables.
2012-02-16T13:40:39Z
<p>Added taxonomy tables.</p>
<table class="diff diff-contentalign-left" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en">
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 13:40, 16 February 2012</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">== Interactions available from major taxonomies ==</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">=== Top 15 uncorrected taxonomy groups in iRefIndex (Taxonomy identifiers as they appear in original source)===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">{| {{table}}</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|''' NCBI taxonomy identifier'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|'''Scientific_name'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|'''Number_of_interactions'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 559292 || Saccharomyces cerevisiae S288c || 216326</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 9606 || Homo sapiens || 145971</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 7227 || Drosophila melanogaster || 47389</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 4932 || Saccharomyces cerevisiae || 46966</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 40674 || Mammalia || 36307</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 10090 || Mus musculus || 21487</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 83333 || Escherichia coli K-12 || 17673</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 4896 || Schizosaccharomyces pombe || 15493</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 6239 || Caenorhabditis elegans || 14020</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 197 || Campylobacter jejuni || 12028</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 3702 || Arabidopsis thaliana || 9911</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 10116 || Rattus norvegicus || 6917</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 562 || Escherichia coli || 5366</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 632 || Yersinia pestis || 3823</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 243276 || Treponema pallidum subsp. pallidum str. Nichols || 3642</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|}</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">* Full list [[http://irefindex.uio.no/wikifiles//images/1/15/Interactions_by_taxonomy_beta8_original.pdf]]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">===Top 15 corrected taxonomy groups in iRefIndex (Taxonomy identifiers corrected using sequence database information)=== </ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">{| {{table}}</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|''' NCBI taxonomy identifier'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|'''Scientific_name'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| align="center" style="background:#f0f0f0;"|'''Number_of_interactions'''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 559292 || Saccharomyces cerevisiae S288c || 225644</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 9606 || Homo sapiens || 156006</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 7227 || Drosophila melanogaster || 47388</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 10090 || Mus musculus || 18312</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 83333 || Escherichia coli K-12 || 17408</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 284812 || Schizosaccharomyces pombe 972h- || 15693</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 6239 || Caenorhabditis elegans || 14020</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 197 || Campylobacter jejuni || 12028</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 3702 || Arabidopsis thaliana || 9911</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 10116 || Rattus norvegicus || 5383</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 155864 || Escherichia coli O157 H7 str. EDL933 || 4953</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 632 || Yersinia pestis || 3823</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 243276 || Treponema pallidum subsp. pallidum str. Nichols || 3643</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 1148 || Synechocystis sp. PCC 6803 || 3240</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">| 1392 || Bacillus anthracis || 3090</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|}</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">* Full list [[http://irefindex.uio.no/wikifiles//images/c/c3/Interactions_by_taxonomy_beta8_corected.pdf]]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Interactions ==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
</table>
PaulBoddie
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=3869&oldid=prev
PaulBoddie: Updated for the latest build.
2011-10-19T12:39:03Z
<p>Updated for the latest build.</p>
<a href="http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=3869&oldid=3712">Show changes</a>
PaulBoddie
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=3712&oldid=prev
PaulBoddie: Updated statistics.
2011-09-02T10:29:12Z
<p>Updated statistics.</p>
<a href="http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=3712&oldid=3643">Show changes</a>
PaulBoddie
http://irefindex.vib.be/wiki/index.php?title=Statistics_iRefIndex_9.0&diff=3643&oldid=prev
PaulBoddie: Added a tentative page for iRefIndex 9.0.
2011-07-11T17:47:29Z
<p>Added a tentative page for iRefIndex 9.0.</p>
<p><b>New page</b></p><div>== Interactions ==<br />
<br />
{|<br />
| BIND||62901<br />
|-<br />
| GRID||24424 || 263295<br />
|-<br />
| DIP||25910 || 38242 || 89716<br />
|-<br />
| INTACT||25434 || 37330 || 39017 || 155235<br />
|-<br />
| MINT||22278 || 40367 || 36677 || 47248 || 85758<br />
|-<br />
| HPRD||1955 || 8695 || 1125 || 5667 || 4489 || 40460<br />
|-<br />
| OPHID||2418 || 9274 || 1462 || 7537 || 6911 || 10267 || 47479<br />
|-<br />
| MPACT||6714 || 7768 || 6992 || 6210 || 6464 || 0 || 0 || 13311<br />
|-<br />
| MPPI||387 || 153 || 63 || 98 || 93 || 160 || 187 || 0 || 830<br />
|-<br />
| CORUM||248 || 193 || 115 || 244 || 119 || 248 || 237 || 0 || 15 || 2607<br />
|-<br />
| BIND_TRANSLATION||56114 || 24426 || 25078 || 24832 || 22203 || 2206 || 2725 || 6542 || 344 || 186 || 60212<br />
|-<br />
| INNATEDB||339 || 1273 || 403 || 789 || 654 || 1045 || 1221 || 0 || 52 || 82 || 399 || 7000<br />
|-<br />
| MATRIXDB||4 || 11 || 2 || 15 || 2 || 14 || 24 || 0 || 2 || 0 || 4 || 5 || 201<br />
|-<br />
| MPILIT||24 || 0 || 85 || 108 || 32 || 0 || 0 || 0 || 0 || 0 || 24 || 0 || 0 || 744<br />
|-<br />
| MPIIMEX||7 || 0 || 25 || 33 || 14 || 0 || 0 || 0 || 0 || 0 || 7 || 0 || 0 || 30 || 473<br />
|-<br />
| ||BIND||GRID||DIP||INTACT||MINT||HPRD||OPHID||MPACT||MPPI||CORUM||BIND_TRANSLATION||INNATEDB||MATRIXDB||MPILIT||MPIIMEX<br />
|-<br />
| ||(5184)||(188537)||(27825)||(83340)||(19066)||(24359)||(28562)||(1588)||(248)||(1932)||(3054)||(4297)||(156)||(540)||(398)<br />
|}<br />
<br />
== Interactors ==<br />
<br />
{|<br />
| BIND||40790<br />
|-<br />
| GRID||17983 || 33559<br />
|-<br />
| DIP||17562 || 18347 || 29969<br />
|-<br />
| INTACT||19129 || 23211 || 24531 || 52751<br />
|-<br />
| MINT||16844 || 18434 || 19654 || 25479 || 31621<br />
|-<br />
| HPRD||2926 || 5803 || 3484 || 6005 || 4536 || 9824<br />
|-<br />
| OPHID||3400 || 5928 || 4220 || 6976 || 5398 || 6218 || 9577<br />
|-<br />
| MPACT||4585 || 4477 || 4730 || 4932 || 4795 || 0 || 1 || 4976<br />
|-<br />
| MPPI||682 || 476 || 470 || 636 || 564 || 316 || 424 || 0 || 864<br />
|-<br />
| CORUM||2072 || 2344 || 2212 || 3217 || 2532 || 1858 || 2248 || 0 || 417 || 4365<br />
|-<br />
| BIND_TRANSLATION||35081 || 17444 || 16970 || 18582 || 16279 || 2960 || 3333 || 4189 || 660 || 1932 || 37155<br />
|-<br />
| INNATEDB||1620 || 2076 || 1791 || 2564 || 2136 || 1707 || 2112 || 0 || 359 || 1148 || 1622 || 3403<br />
|-<br />
| MATRIXDB||112 || 111 || 87 || 138 || 116 || 111 || 144 || 0 || 18 || 52 || 111 || 89 || 221<br />
|-<br />
| MPILIT||92 || 0 || 332 || 440 || 227 || 0 || 0 || 0 || 0 || 0 || 92 || 0 || 0 || 936<br />
|-<br />
| MPIIMEX||33 || 0 || 111 || 128 || 65 || 0 || 0 || 0 || 0 || 0 || 31 || 0 || 0 || 92 || 473<br />
|-<br />
| ||BIND||GRID||DIP||INTACT||MINT||HPRD||OPHID||MPACT||MPPI||CORUM||BIND_TRANSLATION||INNATEDB||MATRIXDB||MPILIT||MPIIMEX<br />
|-<br />
| ||(4337)||(6423)||(2236)||(15606)||(4032)||(1718)||(943)||(11)||(35)||(521)||(1398)||(269)||(35)||(366)||(282)<br />
|}<br />
<br />
== Summary of mapping interaction records to RIGs (Table 5) ==<br />
<br />
{|<br />
| align="center" style="background:#f0f0f0;"|'''Source'''||align="center" style="background:#f0f0f0;"|'''Total records'''||align="center" style="background:#f0f0f0;"|'''Protein-only interactors'''||align="center" style="background:#f0f0f0;"|'''PPI Assigned to RIGID'''||align="center" style="background:#f0f0f0;"|'''Unique RIGIDs'''<br />
|-<br />
| bind||193648||93957||91268(97.1381%)||62901(68.9190%)<br />
|-<br />
| grid||392218||386984||386462(99.8651%)||263295(68.1296%)<br />
|-<br />
| dip||90994||90994||89910(98.8087%)||89716(99.7842%)<br />
|-<br />
| intact||183079||181384||180718(99.6328%)||155235(85.8990%)<br />
|-<br />
| mint||122775||122775||122269(99.5879%)||85758(70.1388%)<br />
|-<br />
| HPRD||83022||83022||83022(100.0000%)||40460(48.7341%)<br />
|-<br />
| ophid||73257||73257||73160(99.8676%)||47479(64.8975%)<br />
|-<br />
| MPACT||16504||16504||16273(98.6003%)||13311(81.7981%)<br />
|-<br />
| MPPI||1814||1814||1699(93.6604%)||830(48.8523%)<br />
|-<br />
| CORUM||2844||2844||2844(100.0000%)||2607(91.6667%)<br />
|-<br />
| BIND_Translation||192923||87081||83349(95.7143%)||60212(72.2408%)<br />
|-<br />
| InnateDB||14729||11476||11248(98.0132%)||7000(62.2333%)<br />
|-<br />
| MatrixDB||846||349||321(91.9771%)||201(62.6168%)<br />
|-<br />
| mpilit||745||745||745(100.0000%)||744(99.8658%)<br />
|-<br />
| mpiimex||473||473||473(100.0000%)||473(100.0000%)<br />
|-<br />
| ALL||1369871||1153659||1143761(99.1420%)||532634(46.5686%)<br />
|}<br />
<br />
== Assignment of protein interactors to ROGs (Table 3) ==<br />
<br />
{|<br />
| align="center" style="background:#f0f0f0;"|'''Source'''||align="center" style="background:#f0f0f0;"|'''Protein_Intractors'''||align="center" style="background:#f0f0f0;"|'''Assigned'''||align="center" style="background:#f0f0f0;"|'''%'''||align="center" style="background:#f0f0f0;"|'''Arbitrary'''||align="center" style="background:#f0f0f0;"|'''N_and_Y'''||align="center" style="background:#f0f0f0;"|'''Unassigned'''||align="center" style="background:#f0f0f0;"|'''Unique proteins'''<br />
|-<br />
| bind||285482||272483||95.4466||0||9075||3924||40790<br />
|-<br />
| BIND_Translation||264346||239988||90.7856||73||15383||8902||37155<br />
|-<br />
| CORUM||12916||12909||99.9458||7||0||0||4365<br />
|-<br />
| dip||30978||29401||94.9093||640||454||483||29969<br />
|-<br />
| grid||41420||34125||82.3877||7065||7||223||33559<br />
|-<br />
| HPRD||123812||103372||83.4911||20209||231||0||9824<br />
|-<br />
| InnateDB||27209||26914||98.9158||0||0||295||3403<br />
|-<br />
| intact||150972||148103||98.0996||34||2433||402||52751<br />
|-<br />
| MatrixDB||1123||1077||95.9038||0||0||46||221<br />
|-<br />
| mint||87509||83389||95.2919||48||3927||145||31621<br />
|-<br />
| MPACT||40349||40098||99.3779||0||1||250||4976<br />
|-<br />
| mpiimex||946||946||100.0000||0||0||0||473<br />
|-<br />
| mpilit||1490||1486||99.7315||3||1||0||936<br />
|-<br />
| MPPI||3628||3456||95.2591||0||42||130||864<br />
|-<br />
| ophid||146423||145149||99.1299||265||1003||6||9577<br />
|-<br />
| All||1218603||1142896||93.7874||28344||32557||14806||96059<br />
|}<br />
<br />
== ROG summary ==<br />
<br />
{|<br />
| align="center" style="background:#f0f0f0;"|'''Decimal_score'''||align="center" style="background:#f0f0f0;"|'''Binary_flag'''||align="center" style="background:#f0f0f0;"|'''String_score'''||align="center" style="background:#f0f0f0;"|'''Score_class'''||align="center" style="background:#f0f0f0;"|'''Proteins'''||align="center" style="background:#f0f0f0;"|'''Percentage'''||align="center" style="background:#f0f0f0;"|'''bind'''||align="center" style="background:#f0f0f0;"|'''grid'''||align="center" style="background:#f0f0f0;"|'''dip'''||align="center" style="background:#f0f0f0;"|'''intact'''||align="center" style="background:#f0f0f0;"|'''mint'''||align="center" style="background:#f0f0f0;"|'''mpiimex'''||align="center" style="background:#f0f0f0;"|'''mpilit'''||align="center" style="background:#f0f0f0;"|'''HPRD'''||align="center" style="background:#f0f0f0;"|'''ophid'''||align="center" style="background:#f0f0f0;"|'''InnateDB'''||align="center" style="background:#f0f0f0;"|'''MatrixDB'''||align="center" style="background:#f0f0f0;"|'''MPACT'''||align="center" style="background:#f0f0f0;"|'''BIND_Translation'''||align="center" style="background:#f0f0f0;"|'''MPPI'''||align="center" style="background:#f0f0f0;"|'''CORUM'''<br />
|-<br />
| 786||000000001100010010||STO+||-1||8850||0.7262%||0||0||0||0||0||0||0||8850||0||0||0||0||0||0||0<br />
|-<br />
| 898||000000001110000010||SMO+||-1||20||0.0016%||0||0||0||16||0||0||0||4||0||0||0||0||0||0||0<br />
|-<br />
| 1794||000000011100000010||SOX+||-1||8||0.0007%||0||0||0||6||2||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 131093||100000000000010101||PUTQ||-1||5||0.0004%||0||0||0||5||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 163905||101000000001000001||PDYQ||-1||2||0.0002%||0||0||0||0||0||0||0||0||0||0||0||0||2||0||0<br />
|-<br />
| 914||000000001110010010||STMO+||-1||2||0.0002%||0||0||0||0||0||0||0||2||0||0||0||0||0||0||0<br />
|-<br />
| 1922||000000011110000010||SMOX+||-1||2||0.0002%||0||0||0||2||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 218370||110101010100000010||SXLENQ+||-1||1||0.0001%||0||0||0||1||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 163921||101000000001010001||PTDYQ||-1||1||0.0001%||0||0||0||0||0||0||0||0||0||0||0||0||1||0||0<br />
|-<br />
| 1||000000000000000001||P||1||809581||66.4352%||229929||21809||0||147356||81034||934||1472||0||124771||26914||828||30649||127973||3021||12891<br />
|-<br />
| 2||000000000000000010||S||1||51662||4.2394%||0||41||28210||15||294||0||0||13141||0||0||0||9375||586||0||0<br />
|-<br />
| 131201||100000000010000001||PMQ||1||23587||1.9356%||0||0||0||0||0||0||0||0||0||0||0||0||23587||0||0<br />
|-<br />
| 554||000000001000101010||SVGO||1||17263||1.4166%||0||0||0||0||0||0||0||17263||0||0||0||0||0||0||0<br />
|-<br />
| 8194||000010000000000010||SI||1||12336||1.0123%||12336||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 65||000000000001000001||PD||1||8057||0.6612%||8055||0||0||0||2||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 130||000000000010000010||SM||1||6594||0.5411%||0||0||0||0||0||0||0||6594||0||0||0||0||0||0||0<br />
|-<br />
| 41||000000000000101001||PVG||1||1936||0.1589%||0||1936||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 42||000000000000101010||SVG||1||1123||0.0922%||0||0||122||0||0||0||0||1001||0||0||0||0||0||0||0<br />
|-<br />
| 129||000000000010000001||PM||1||688||0.0565%||470||0||0||49||0||0||0||0||0||0||137||0||0||32||0<br />
|-<br />
| 139265||100010000000000001||PIQ||1||337||0.0277%||0||0||0||0||0||0||0||0||0||0||0||0||337||0||0<br />
|-<br />
| 10||000000000000001010||SV||1||84||0.0069%||0||0||5||44||35||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 8193||000010000000000001||PI||1||37||0.0030%||0||0||0||29||8||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 66||000000000001000010||SD||1||35||0.0029%||0||4||0||0||13||0||0||0||0||0||18||0||0||0||0<br />
|-<br />
| 9||000000000000001001||PV||1||5||0.0004%||0||0||0||0||5||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 5||000000000000000101||PU||2||21571||1.7701%||0||0||0||61||234||9||2||0||20246||0||0||0||679||322||18<br />
|-<br />
| 16386||000100000000000010||SE||2||5377||0.4412%||5377||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 770||000000001100000010||SO+||2||3486||0.2861%||0||0||0||4||0||0||0||3482||0||0||0||0||0||0||0<br />
|-<br />
| 147458||100100000000000010||SEQ||2||1985||0.1629%||0||0||0||4||0||0||0||0||0||0||0||0||1981||0||0<br />
|-<br />
| 6||000000000000000110||SU||2||173||0.0142%||0||0||128||26||5||0||0||13||0||0||0||0||1||0||0<br />
|-<br />
| 16385||000100000000000001||PE||2||153||0.0126%||0||0||0||144||9||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 147457||100100000000000001||PEQ||2||53||0.0043%||0||0||0||0||0||0||0||0||0||0||0||0||53||0||0<br />
|-<br />
| 773||000000001100000101||PUO+||2||17||0.0014%||0||0||0||7||1||0||0||0||9||0||0||0||0||0||0<br />
|-<br />
| 1797||000000011100000101||PUOX+||2||4||0.0003%||0||0||0||4||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 16514||000100000010000010||SME||2||3||0.0002%||3||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 774||000000001100000110||SUO+||2||1||0.0001%||0||0||0||1||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 17||000000000000010001||PT||3||87494||7.1799%||13466||10310||0||176||1706||3||12||0||118||0||2||7||61647||47||0<br />
|-<br />
| 18||000000000000010010||ST||3||33709||2.7662%||0||25||931||1||0||0||0||32752||0||0||0||0||0||0||0<br />
|-<br />
| 146||000000000010010010||STM||3||16663||1.3674%||0||0||0||0||0||0||0||16663||0||0||0||0||0||0||0<br />
|-<br />
| 131217||100000000010010001||PTMQ||3||5300||0.4349%||0||0||0||0||0||0||0||0||0||0||0||0||5300||0||0<br />
|-<br />
| 81||000000000001010001||PTD||3||1591||0.1306%||1500||0||0||0||0||0||0||0||0||0||91||0||0||0||0<br />
|-<br />
| 8210||000010000000010010||STI||3||855||0.0702%||855||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 145||000000000010010001||PTM||3||190||0.0156%||135||0||0||21||0||0||0||0||0||0||0||0||0||34||0<br />
|-<br />
| 163985||101000000010010001||PTMYQ||3||57||0.0047%||0||0||0||0||0||0||0||0||0||0||0||0||57||0||0<br />
|-<br />
| 139281||100010000000010001||PTIQ||3||42||0.0034%||0||0||0||0||0||0||0||0||0||0||0||0||42||0||0<br />
|-<br />
| 8209||000010000000010001||PTI||3||15||0.0012%||0||0||0||15||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 16530||000100000010010010||STME||3||13||0.0011%||13||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 26||000000000000011010||SVT||3||1||0.0001%||0||0||0||1||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 82||000000000001010010||STD||3||1||0.0001%||0||0||0||0||0||0||0||0||0||0||1||0||0||0||0<br />
|-<br />
| 147474||100100000000010010||STEQ||4||668||0.0548%||0||0||0||2||0||0||0||0||0||0||0||0||666||0||0<br />
|-<br />
| 16402||000100000000010010||STE||4||345||0.0283%||344||0||1||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 22||000000000000010110||SUT||4||138||0.0113%||0||0||4||0||0||0||0||134||0||0||0||0||0||0||0<br />
|-<br />
| 790||000000001100010110||SUTO+||4||48||0.0039%||0||0||0||19||27||0||0||2||0||0||0||0||0||0||0<br />
|-<br />
| 789||000000001100010101||PUTO+||4||19||0.0016%||0||0||0||18||1||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 16401||000100000000010001||PTE||4||3||0.0002%||0||0||0||3||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 5378||000001010100000010||SXL+||5||18701||1.5346%||0||0||0||11||1||0||0||18689||0||0||0||0||0||0||0<br />
|-<br />
| 131073||100000000000000001||PQ||5||16324||1.3396%||0||0||0||6||0||0||0||0||0||0||0||0||16318||0||0<br />
|-<br />
| 4393||000001000100101001||PVGL+||5||7049||0.5784%||0||7049||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 810||000000001100101010||SVGO+||5||3471||0.2848%||0||0||0||0||0||0||0||3471||0||0||0||0||0||0||0<br />
|-<br />
| 4394||000001000100101010||SVGL+||5||1621||0.1330%||0||0||112||0||0||0||0||1509||0||0||0||0||0||0||0<br />
|-<br />
| 131089||100000000000010001||PTQ||5||860||0.0706%||0||0||0||48||0||0||0||0||0||0||0||0||812||0||0<br />
|-<br />
| 4354||000001000100000010||SL+||5||528||0.0433%||0||16||510||2||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 4357||000001000100000101||PUL+||5||241||0.0198%||0||0||0||0||0||0||3||0||222||0||0||0||9||0||7<br />
|-<br />
| 21||000000000000010101||PUT||5||108||0.0089%||0||0||0||20||12||0||0||0||5||0||0||67||4||0||0<br />
|-<br />
| 4373||000001000100010101||PUTL+||5||70||0.0057%||0||0||0||8||0||0||0||0||4||0||0||0||58||0||0<br />
|-<br />
| 5381||000001010100000101||PUXL+||5||56||0.0046%||0||0||0||12||5||0||0||0||39||0||0||0||0||0||0<br />
|-<br />
| 5386||000001010100001010||SVXL+||5||43||0.0035%||0||0||0||1||42||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 4374||000001000100010110||SUTL+||5||25||0.0021%||0||0||12||0||0||0||0||7||0||0||0||0||6||0||0<br />
|-<br />
| 4358||000001000100000110||SUL+||5||6||0.0005%||0||0||6||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 5382||000001010100000110||SUXL+||5||4||0.0003%||0||0||0||0||0||0||0||4||0||0||0||0||0||0||0<br />
|-<br />
| 1802||000000011100001010||SVOX+||5||1||0.0001%||0||0||0||0||1||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 32769||001000000000000001||PY||6||15999||1.3129%||3696||5||0||1873||3389||0||1||0||750||0||0||0||6280||5||0<br />
|-<br />
| 65601||010000000001000001||PDN||6||8727||0.7161%||52||0||0||2||247||0||0||0||253||0||0||0||8168||5||0<br />
|-<br />
| 81922||010100000000000010||SEN||6||4417||0.3625%||4417||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 65537||010000000000000001||PN||6||969||0.0795%||35||0||189||263||256||0||0||215||0||0||0||0||0||11||0<br />
|-<br />
| 32833||001000000001000001||PDY||6||769||0.0631%||769||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 32770||001000000000000010||SY||6||424||0.0348%||0||2||262||88||25||0||0||0||0||0||0||1||46||0||0<br />
|-<br />
| 163969||101000000010000001||PMYQ||6||401||0.0329%||0||0||0||0||0||0||0||0||0||0||0||0||401||0||0<br />
|-<br />
| 212993||110100000000000001||PENQ||6||279||0.0229%||0||0||0||0||0||0||0||0||0||0||0||0||279||0||0<br />
|-<br />
| 73729||010010000000000001||PIN||6||198||0.0162%||0||0||0||198||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 32785||001000000000010001||PTY||6||147||0.0121%||86||0||0||2||0||0||0||0||0||0||0||0||59||0||0<br />
|-<br />
| 196609||110000000000000001||PNQ||6||31||0.0025%||0||0||0||0||0||0||0||0||0||0||0||0||31||0||0<br />
|-<br />
| 81921||010100000000000001||PEN||6||27||0.0022%||0||0||0||1||10||0||0||0||0||0||0||0||0||16||0<br />
|-<br />
| 65617||010000000001010001||PTDN||6||23||0.0019%||0||0||0||0||0||0||0||0||0||0||0||0||23||0||0<br />
|-<br />
| 196625||110000000000010001||PTNQ||6||22||0.0018%||0||0||0||0||0||0||0||0||0||0||0||0||22||0||0<br />
|-<br />
| 65553||010000000000010001||PTN||6||21||0.0017%||0||0||1||4||0||0||0||16||0||0||0||0||0||0||0<br />
|-<br />
| 81938||010100000000010010||STEN||6||19||0.0016%||19||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 213009||110100000000010001||PTENQ||6||14||0.0011%||0||0||0||0||0||0||0||0||0||0||0||0||14||0||0<br />
|-<br />
| 32897||001000000010000001||PMY||6||2||0.0002%||0||0||0||0||0||0||0||0||0||0||0||0||0||2||0<br />
|-<br />
| 32786||001000000000010010||STY||6||2||0.0002%||0||0||2||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 81937||010100000000010001||PTEN||6||2||0.0002%||0||0||0||0||0||0||0||0||0||0||0||0||0||2||0<br />
|-<br />
| 147473||100100000000010001||PTEQ||6||2||0.0002%||0||0||0||0||0||0||0||0||0||0||0||0||2||0||0<br />
|-<br />
| 163857||101000000000010001||PTYQ||6||1||0.0001%||0||0||0||1||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 81986||010100000001000010||SDEN||6||1||0.0001%||1||0||0||0||0||0||0||0||0||0||0||0||0||0||0<br />
|-<br />
| 32913||001000000010010001||PTMY||6||1||0.0001%||0||0||0||0||0||0||0||0||0||0||0||0||0||1||0<br />
|}<br />
<br />
== Scores (Table 2) ==<br />
<br />
{|<br />
| align="center" style="background:#f0f0f0;"|'''Character'''||align="center" style="background:#f0f0f0;"|'''Description of feature (when the value is 1)'''||align="center" style="background:#f0f0f0;"|'''Frequency'''<br />
|-<br />
| D||The source database (D) listed in the interaction record is different than what is expected for the given accession for the protein. In specific cases, this difference is tolerated and the assignment is made.||19207(1.5955%)<br />
|-<br />
| E||The protein reference was a retired NCBI Identifier or a UniProt identifier. NCBI's eUtils (E) were used to retrieve the current accession and/or sequence. For the identifiers still with no sequence after going through eUtils, sequence information obtained from UniProt.||13362(1.11%)<br />
|-<br />
| G||The interaction record's reference for the protein was an EntrezGene (G) identifier. The corresponding products of the gene were used to make the assignment.||32463(2.6967%)<br />
|-<br />
| L||More than one possible assignment is possible (see + above). (e.g. isoforms for a geneid) In such a situation, references are picked using a ranking system (first look for RefSeq, then UniProt). Even after this ranking if ambiguity exists, the reference with lengthiest sequences selected. (Please note that this score class definition is different from originally published one)||28345(2.3546%)<br />
|-<br />
| M||The protein reference listed by the interaction record was a typographical modification (M) of a known accession. In specific cases, this variation is tolerated and the assignment is made.||53523(4.4462%)<br />
|-<br />
| +||More than one possible assignment is possible (+). This case may arise in one of three ways. 1) The reference supplied by the interaction record requires updating but more than one possibility exists. For example, Q7XJL8 was found to be a secondary accession in three separate UniProt records (Q3EBZ2, Q6DR20, and Q8GWA9). 2) The secondary references supplied by the interaction record point to more than one unique protein sequence. 3) An EntrezGene identifier is provided in the interaction record as a protein reference. This identifier points to more than one protein product. An attempt is made to resolve this ambiguity as indicated by ROG score features O, X or L (see below).||44274(3.6779%)<br />
|-<br />
| N||The protein reference, taxonomy identifier and sequence for the protein as provided in the interaction record are used to make a new entry in the SEGUID table. The protein interactor is assigned the newly (N) generated ROG identifier.||14751(1.2254%)<br />
|-<br />
| O||More than one possible assignment is possible (see + above). The assignment chosen has a SEGUID that is identical to the SEGUID of the original (O) sequence provided in the interaction record.||33192(2.7573%)<br />
|-<br />
| I||The protein reference used was an NCBI GenInfo Identifier (I).||13820(1.148%)<br />
|-<br />
| U||The protein reference listed in the interaction record and used to make the assignment was a secondary UniProt accession and was updated (U) to a primary UniProt accession in order to make the assignment.||22486(1.8679%)<br />
|-<br />
| T||The taxonomy (T) identifier for the protein (as supplied by the interaction record) differed from what was found in the protein sequence record. This discrepancy was tolerated and the assignment was made||157327(13.0692%)<br />
|-<br />
| V||The protein reference listed by the interaction record contained version (V) information that was ignored. For example, RefSeq accession.version NP_012420.1 was listed but treated as RefSeq accession NP_012420.||32597(2.7078%)<br />
|-<br />
| Q||The protein reference used to make the assignment was of the type 'see-also'. See PSI-MI Path: entrySet/entry/interactorList/interactor/xref/primaryRef/refType = 'see-also'.||49972(4.1512%)<br />
|-<br />
| P||The interaction record's primary (P) reference for the protein was used to make the assignment||1013088(84.1577%)<br />
|-<br />
| S||One of the interaction record's secondary (S) references for the protein was used to make the assignment||190709(15.8423%)<br />
|-<br />
| Y|| the accession was referring an accession which was removed from RefSeq or UniProt after beta3 build of iRefIndex (March 9th, 2009)||17806(1.4792%)<br />
|-<br />
| X||More than one possible assignment is possible (see + above). The assignment chosen has the same taxonomy (X) identifier as listed in the interaction record||18820(1.5634%)<br />
|}<br />
<br />
[[Category:iRefIndex]]</div>
PaulBoddie